Welcome to the world of UniRE, an amalgamation of simplified processes for extracting entity relations using a unified label space. This guide will walk you through the essential steps, requirements, and troubleshooting ideas needed to get your entity relation extraction process up and running smoothly.
Requirements
Before diving into implementation, ensure you have the following software installed:
- Python: 3.7.6
- Pytorch: 1.8.1
- Transformers: 4.2.2
- Configargparse: 1.2.3
- Bidict: 0.20.0
- Fire: 0.3.1
Datasets
UniRE supports processing for three specific datasets: ACE2004, ACE2005, and SciERC. For details about these datasets and processing scripts, navigate to our data repository.
Training the Model
To train the model on different datasets, you will utilize the `entity_relation_joint_decoder.py` script with the following commands:
For ACE2004:
bash
python entity_relation_joint_decoder.py --config_file config.yml --save_dir ckptace2004_bert --data_dir dataACE2004fold1 --fine_tune --device 0
For ACE2005:
bash
python entity_relation_joint_decoder.py --config_file config.yml --save_dir ckptace2005_bert --data_dir dataACE2005 --fine_tune --device 0
For SciERC:
bash
python entity_relation_joint_decoder.py --config_file config.yml --save_dir ckptscierc_scibert --data_dir dataSciERC --bert_model_name allenai/scibert_scivocab_uncased --epochs 300 --early_stop 50 --fine_tune --device 0
Note that the default settings require a GPU with 32GB RAM. If you encounter an **Out Of Memory (OOM)** error, try reducing the train_batch_size
and increasing gradient_accumulation_steps
. Think of this process like filling a bucket: if it’s too full, you can either use a smaller bucket or fill it up gradually over time to prevent overflow.
Inference
To perform inference on the ACE2005 dataset, run the following command:
bash
python entity_relation_joint_decoder.py --config_file config.yml --save_dir ckptace2005_bert --data_dir dataACE2005 --device 0 --log_file test.log --test
Pre-trained Models
A pre-trained UniRE model for the ACE2005 dataset is available. This model has been trained using a GeForce RTX 2080 Ti, meaning the performance may slightly differ from what’s presented in the original paper. To download the BERT based pre-trained model, follow this link (password: 151m, size: 420MB).
The performance metrics for the pre-trained model on the ACE2005 test set are as follows:
- Entity: P: 89.03%, R: 88.81%, F1: 88.92%
- Relation (strict): P: 68.71%, R: 60.25%, F1: 64.21%
Troubleshooting
If you face any issues while setting up or running UniRE, consider the following troubleshooting options:
- Ensure your Python and package versions are correct and compatible.
- Verify that your dataset paths are correctly set in the configuration files.
- If you encounter memory issues, look at the recommendations regarding
train_batch_size
andgradient_accumulation_steps
.
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Conclusion
At fxis.ai, we believe that such advancements are crucial for the future of AI, as they enable more comprehensive and effective solutions. Our team is continually exploring new methodologies to push the envelope in artificial intelligence, ensuring that our clients benefit from the latest technological innovations.